Metadata-Version: 2.1
Name: bioio
Version: 0.9.0
Summary: Image reading, metadata management, and image writing for Microscopy images in Python
Author-email: Eva Maxfield Brown <evamaxfieldbrown@gmail.com>, Dan Toloudis <danielt@alleninstitute.org>
License: BSD License
Project-URL: Homepage, https://github.com/bioio-devs/bioio
Project-URL: Bug Tracker, https://github.com/bioio-devs/bioio/issues
Project-URL: Documentation, https://bioio-devs.github.io/bioio
Project-URL: User Support, https://github.com/bioio-devs/bioio/issues
Classifier: Development Status :: 4 - Beta
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: bioio-base >=0.9.1
Requires-Dist: dask[array] >=2021.4.1
Requires-Dist: fsspec >=2022.8.0
Requires-Dist: imageio[ffmpeg] <2.28.0,>=2.11.0
Requires-Dist: numpy <2.0.0,>=1.21.0
Requires-Dist: ome-types[lxml] >=0.4.0
Requires-Dist: ome-zarr >=0.6.1
Requires-Dist: semver >=3.0.1
Requires-Dist: tifffile >=2021.8.30
Requires-Dist: zarr <3.0.0,>=2.6.0
Provides-Extra: dev
Requires-Dist: ipython >=8.4.0 ; extra == 'dev'
Provides-Extra: docs
Requires-Dist: m2r2 >=0.2.7 ; extra == 'docs'
Requires-Dist: Sphinx >=4.0.0 ; extra == 'docs'
Requires-Dist: furo >=2022.4.7 ; extra == 'docs'
Requires-Dist: numpydoc ; extra == 'docs'
Requires-Dist: sphinx-copybutton ; extra == 'docs'
Requires-Dist: docutils <0.19,>=0.18 ; extra == 'docs'
Provides-Extra: lint
Requires-Dist: pre-commit >=2.20.0 ; extra == 'lint'
Provides-Extra: test
Requires-Dist: coverage >=5.1 ; extra == 'test'
Requires-Dist: pytest >=5.4.3 ; extra == 'test'
Requires-Dist: pytest-cov >=2.9.0 ; extra == 'test'
Requires-Dist: pytest-raises >=0.11 ; extra == 'test'
Requires-Dist: quilt3 ; extra == 'test'

# bioio

[![Build Status](https://github.com/bioio-devs/bioio/actions/workflows/ci.yml/badge.svg)](https://github.com/bioio-devs/bioio/actions)
[![Documentation](https://github.com/bioio-devs/bioio/actions/workflows/docs.yml/badge.svg)](https://bioio-devs.github.io/bioio)

Image reading, metadata management, and image writing for Microscopy images in Python

---

## Installation

**Stable Release:** `pip install bioio`<br>
**Development Head:** `pip install git+https://github.com/bioio-devs/bioio.git`

## Quickstart

```python
from bioio import example

print(example.str_len("hello"))  # prints 5
```

## Documentation

For full package documentation please visit [bioio-devs.github.io/bioio](https://bioio-devs.github.io/bioio).

## Development

See [CONTRIBUTING.md](CONTRIBUTING.md) for information related to developing the code.

**BSD License**
